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Data · dataset · 2015

Validation tool for traction force microscopy

Listed in DataCite

Traction force microscopy (TFM) is commonly used to estimate cells' traction forces from the deformation that they cause on their substrate.

Description

The accuracy of TFM highly depends on the computational methods used to measure the deformation of the substrate and estimate the forces, and also on the specifics of the experimental set-up. Computer simulations can be used to evaluate the effect of both the computational methods and the experimental set-up without the need to perform numerous experiments.

Here, we present one such TFM simulator that addresses several limitations of the existing ones. As a proof of principle, we recreate a TFM experimental set-up, and apply a classic 2D TFM algorithm to recover the forces. In summary, our simulator provides a valuable tool to study the performance, refine experimentally, and guide the extraction of biological conclusions from TFM experiments.

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Topics

Stated by source
Biological sciences
Inferred from text
Biomedical engineering 68% · Microscopy 75%
Provenance · 1 source records, 14 field assertions
SourceKeyLast seenRaw
DataCite10.6084/m9.figshare.112150913 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[field].anzsrc:group:4003enrichment · DataCitetaxonomy-embedding@1.0.0title+keywords+description (68%)
concepts[field].fos:biological-sciencessource · DataCiteconnector:datacite@1.0.0
concepts[field].local:field:engineeringmapping · DataCitevocabulary-mapper@1.0.0keywords['Engineering']
concepts[field].local:field:life-sciencesmapping · DataCitevocabulary-mapper@1.0.0keywords['Biological Sciences']
concepts[field].local:field:medicine-healthmapping · DataCitevocabulary-mapper@1.0.0keywords['Medicine']
concepts[modality].local:modality:microscopyenrichment · DataCitekeyword-concept-rules@1.0.0title+description (75%)
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