Data · dataset · 2026
<p>Computational and experimental evidence supporting activation of the FABP5–NF-κB signaling axis.</p>
Listed in ZivaHub
<p>(A–C) Representative top-ranked protein–protein docking conformations of FABP5 with IκBα (A), IKKβ (B), and P65 (RelA) (C).
Description
(D) RMSD profiles from MD simulations showing that the FABP5–IκBα and FABP5–P65 complexes reached equilibrium after ~80 ns, whereas the FABP5–IKKβ complex exhibited reduced stability. (E) Rg analysis demonstrating stable global compactness of the FABP5–IκBα, FABP5-IKKβ and FABP5–P65 complexes during MD simulations.
(F) SASA analysis showing mild fluctuations for the FABP5–IκBα and FABP5-IKKβ complex and minimal variation for the FABP5–P65 complex. (G) Hydrogen bond analysis illustrating persistent intermolecular hydrogen bonding between FABP5 and NF-κB pathway proteins, with a higher average number observed in the FABP5–P65 complex. (H) RMSF analysis indicating limited residue-level flexibility and high structural stability of the FABP5–IκBα and FABP5–P65 complexes.
Read the rest (1 more)
(I) Residue free energy decomposition identifying key amino acid residues contributing to stabilization of the FABP5–IκBα and FABP5–P65 complexes. (J) Western blot analysis showing that FABP5 overexpression increased phosphorylation of IκBα (p-IκBα) and PD-L1 expression in HCC cells, while NF-κB inhibition by Bay 11–7082 abolished these effects.</p>
Links
Where it is published
- DOI doi.org/10.1371/journal.pone.0356359.g008 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Cancer · Chemistry · Earth & Environmental Science · Genetics · Immunology · Life Sciences · Medicine & Health
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34027518 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:group:3105 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].anzsrc:group:3204 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Immunology'] |
| concepts[field].local:field:chemistry | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |