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Excel · study · 2026

Identifying small regulatory RNA responding to metal availability in Staphylococcus aureus HG001

Listed in NCBI GEO

Small regulatory RNAs (sRNAs) serve as key drivers of bacterial adaptation to environmental fluctuations.

Description

They critically control the adaptive response of Staphylococcus aureus and other pathogens to iron and manganese restriction imposed by the host. However, it is unknown if bacterial sRNAs enable adaptation to other metal-limited environments.

This study examined the repertoire of sRNAs produced by S. aureus in response to metal limitation. This led to the identification of two sRNAs, S1077 and ZinS (RsaX20), which are regulated by zinc (Zn) availability. Further investigations revealed that, similar to the cnt operon from which it derives, S1077 synthesis is controlled by the transcription factors Zur and Fur.

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In contrast, zinS transcription is solely repressed by Zur. Amongst the ZinS targets are several Zn-dependent enzymes, such as the alcohol dehydrogenase Adh, whose synthesis is negatively regulated by ZinS. Loss of ZinS does not alter staphylococcal metal accumulation, suggesting that this sRNA controls a Zn-sparing response.

Remarkably, zinS also encodes a small peptide, ZinP, which is produced in response to Zn limitation. Genomic analysis suggests that the regulatory portion of ZinS emerged from the 3’ untranslated region of ZinP in S. aureus and closely related species after horizontal transfer from phylogenetically distant organisms. All our findings demonstrate that sRNAs facilitate bacterial adaptation to Zn limitation, and that genetic exchange and subsequent neofunctionalization have enabled S. aureus to adapt to metal-restricted environments.

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Life Sciences
Provenance · 1 source records, 6 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE2962237 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title