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Data · dataset · 2013

Assessing potential metabolic capabilities of abundant microbes using metagenomic short-reads

Listed in DataCite

This fileset includes data from a single SOLiD sequencing run on a water sample taken from Puget Sound, WA.

Description

The sequences were checked for quality control and assembled into contigs prior to these analyses. The contigs were annotated using reference databases and separated by their taxonomic identification.

The top taxa were further analyzed to assess their potential metabolic capabiltiy by comparing the genes recovered to the KEGG gene maps of cultured organisms.

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Topics

Stated by source
Biological sciences
From keywords
Ecology · Microbiology
Inferred from text
Sequencing 75%
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
DataCite10.6084/m9.figshare.65476814 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[modality].local:modality:sequencingenrichment · DataCitekeyword-concept-rules@1.0.0title+description (75%)
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