Data · dataset · 2013
MaryGold 7 ecoli simulated metagenome assembly (AMOS bank)
Listed in DataCite
A shotgun dataset was simulated with the 454sim v1.04 package (Lysholm et al., 2011) using default settings from the genomes of seven E. coli strains, to illustrate the effect on metagenome assembly of multiple closely related genomes.
Description
The strains were ABU83972 gi|386637352|ref|NC_017631.1|; BL21_gold gi|253771435|ref|NC_012947.1|; CFT073 gi|26245917|ref|NC_004431.1|; K12_DH10B gi|170079663|ref|NC_010473.1|; O104_H4 gi|410480139|ref|NC_018650.1|; O26_H11 gi|260853213|ref|NC_013361.1| SE11 gi|209917191|ref|NC_011415.1|
Links
Where it is published
- Repository landing page data.4tu.nl/articles/_/12706388/1 ↗
landing page · from DataCite
- DOI doi.org/10.4121/uuid:861d8a8e-bea7-4b11-8bb2-8d8e7cc772ab ↗
DOI / persistent id · from DataCite
Documentation and papers
- 4TU General Terms of Use doi.org/10.4121/resource:terms_of_use ↗
license · from DataCite
- References 10.1093/bioinformatics/btt502 doi.org/10.1093/bioinformatics/btt502 ↗
publication · from DataCite
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.4121/uuid:861d8a8e-bea7-4b11-8bb2-8d8e7cc772ab ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.4121/uuid:861d8a8e-bea7-4b11-8bb2-8d8e7cc772ab ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Computer and information sciences
- From keywords
- Genetics
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.4121/uuid:861d8a8e-bea7-4b11-8bb2-8d8e7cc772ab | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license_text | source · DataCite | connector:datacite@1.0.0 | |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| version_label | source · DataCite | connector:datacite@1.0.0 |