Data · dataset · 2024
Genetic data from 4 leafless vanilla populations
Listed in ScienceDB
We collected 25 leafless vanilla samples from four sites {Ambatofaly (ABF), Ampitolova (APL), Vohitsara (VHT) and Ampotaka (APTK)}.
Description
We removed 15 cm of stems or young buds and preserved them in silica gel, obtaining a total of 100 individuals for the four populations. DNA extraction was performed using Qiagen's DNEASY® plant kit for all 100 specimens.
Seven microsatellite markers developed by Gigant et al (2011) were used to amplify and genotype each individual. Polymerase chain reaction (PCR) with fluorescently-labeled primers was performed in a total volume of 25 μl using a Promega kit (Promega, 2007). The mixture contained 12.5 μl of GoTaq Colourless Master Mix 2X, 2 μl of DNA solution (5 < DNA < 250 ng), 0.4 μM of each primer and 8.5 μl of nuclease-free water.
Read the rest (1 more)
Capillary electrophoresis with an ABI 3130XL automated genetic analyzer (Applied Biosystems) was used to genotype PCR fragments. GENEIOUS PRIME 2019.1 was used for allele size coding.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.09416 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.09416 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license_text | source · scidb cn | connector:scidb_cn@1.0.0 | |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |