Text · study · 2026
SpxA1 and SpxA2 Function as a Stoichiometry-Dependent Regulatory Rheostat Governing Virulence Gene Expression in Group A Streptococcus — NanoString nCounter dataset
Listed in NCBI GEO
Group A Streptococcus (GAS) encodes two paralogs of the Spx transcriptional regulator, SpxA1 and SpxA2, which interact with RNA polymerase to modulate virulence gene expression.
Description
SpxA2 is directly regulated by the LiaFSR three-component system in response to antimicrobial peptide (AMP) stress. To define how SpxA1 and SpxA2 influence virulence gene expression under cell envelope stress, we performed NanoString nCounter analysis using a custom 119-probe codeset (116 endogenous targets plus 3 housekeeping probes: tufA, gyrA, guaB) in wild-type MGAS10870 (emm3) and isogenic deletion mutants (deltaSpxA1 and deltaSpxA2) under three conditions: uninduced (UI), sub-MIC bacitracin (BAC), and sub-MIC human neutrophil peptide-1 (hNP-1).
Differential expression analysis identified condition- and paralog-specific changes in CovR-regulated virulence factor-encoding genes consistent with a stoichiometry-dependent regulatory model.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE334nnn/GSE334410 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334410 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1474979 ncbi.nlm.nih.gov/bioproject/PRJNA1474979 ↗
project · from NCBI GEO
- PubMed 42367948 pubmed.ncbi.nlm.nih.gov/42367948 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Other
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE334410 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |