Data · dataset · 2019
Optimized public databases for genomic prediction of tropical maize lines
Listed in Teesside University Research Data Repository
Throughout this dataset we proposed a hypothetical and realistic scenario in order to apply Genomic Selection (GS) - use of a limited budget and the need to increase genetic variability.
Description
To reach that we tested the feasibility of using genomic and phenotypic information from public databases for prediction of tropical maize inbred lines, seeking to identify how the population structure, the use of optimized training sets (OTS), and the amount of information coming from public databases affect the predictive ability.
The results were encouraging, opening up possibilities to others replicate the same approach with different crops or dataset.
Links
Where it is published
- DOI doi.org/10.17632/tpdnbh29jn.1 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/tpdnbh29jn.1 | 19 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:field:310207 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Quantitative Genetics'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |