Data · dataset · 2025
Analysis files for Nasopharygeal Samples - Output from Bactfast and Virfast tests
Listed in Teesside University Research Data Repository
This data set includes all analysis files generated as a result of the Bactfast and Virfast bioinformatics workflows.
Description
The output is generated as .txt files and is segregated in to folders for each test. For Bactfast - each file provides a summary of the bacterial species identified in each patient sample along with the relative abundance (as a % of the total bacterial reads identified) for each species and also includes a genus abundance.
For Virfast - output is given for viral DNA and viral cDNA respectively, in the same manner described above (i.e. relative abundance of viral species identified in viral DNA or cDNA workflow provided as a % of total viral reads in the sample).
Links
Where it is published
- DOI doi.org/10.17632/gckdgv2n5f.1 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Clinical chemistry · Earth & Environmental Science
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/gckdgv2n5f.1 | 5 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:field:320202 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Diagnostics'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |