Data · dataset · 2026
Data and R code for: Radiocarbon evidence that tree mycorrhizal type modulates mean soil carbon age across depths but not organic matter fractions
Listed in UP Research Data Repository
<p dir="ltr">This record contains the data and R code for the paper "Radiocarbon evidence that tree mycorrhizal type modulates mean soil carbon age across depths but not organic matter fractions". </p><p dir="ltr">Soils were sampled in June 2021 in Yale-Myers Forest, Connecticut, USA.
Description
Each of three stands contained one arbuscular mycorrhizal (AM)-dominated plot and one ectomycorrhizal (EcM)-dominated plot. Each plot contained two subplots, one with and one without the ericoid mycorrhizal shrub.
In each subplot, three horizons were sampled: the Oa; the surface mineral horizon, 0–10 cm below the Oa; and the subsurface mineral horizon, to 30 cm cumulative depth including the Oa. Each sample was separated into particulate (POM, >53 µm) and mineral-associated (MAOM, <53 µm) organic matter. This gives 72 fraction-level observations from 36 soil samples. </p><p dir="ltr">For each fraction: Δ14C, δ13C, δ15N, C and N concentrations (within the fraction and on a whole-soil basis), and C:N ratio.
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For each bulk soil sample: pH and 14-day C mineralisation. For each plot: tree basal area and the share of AM and EcM trees. For each subplot: soil moisture and C-stock-weighted whole-profile Δ14C.
The data also include summary statistics of radiocarbon analytical uncertainty, standards and blanks. data_dictionary.csv defines every column, with units and derivations. </p><p dir="ltr">run_all.R runs the full workflow in about 1 minute and writes every table, figure, fitted model and log to output/. It reproduces data-based figures and tables in the paper and its supplementary information, which comes from a tree survey not included here.
The deposited output/ was produced with R 4.4.1, and the workflow was also checked with R 4.3.3. README.md describes the sampling design, models, file layout and how to check a run. We used the large language model Claude to assist with code workflow editing during revisions; all code, analyses, and outputs were reviewed by the authors.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.34059549.v1 ↗
DOI / persistent id · from researchdata up ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from researchdata up ac za
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science · Terrestrial ecology
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| UP Research Data Repository | oai:figshare.com:article/34059549 | 3 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].anzsrc:field:310308 | mapping · researchdata up ac za | vocabulary-mapper@1.0.0 | keywords['Terrestrial ecology'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · researchdata up ac za | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | /metadata/dc/description |
| license | source · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| title | source · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | /metadata/dc/title |