Excel · study · 2026
Decoding Sequence Recognition Code of Nucleic-Acid Binding Proteins of Human-Infecting DNA Viruses
Listed in NCBI GEO
We applied high-throughput SELEX (HT-SELEX) to profile the DNA-binding specificity of 106 putative nucleic acid–binding proteins (NBPs) from 103 DNA viruses.
Description
Three NBPs derived from viruses whose hosts are not humans (YP_010782993.1, NP_671816.1, and AVM80381.1) were included as negative controls. We identified sequence motifs for 33 proteins.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE309nnn/GSE309420 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE309420 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1336044 ncbi.nlm.nih.gov/bioproject/PRJNA1336044 ↗
project · from NCBI GEO
Topics
- Stated by source
- Other
- From keywords
- Life Sciences
- Inferred from text
- Bioinformatics and computational biology 74%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE309420 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (74%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |