Data · dataset · 2026
Code and benchmarks for a vertically averaged drag term for pseudo-3D Stokes simulations
Listed in DaRUS
Content: This data set includes snapshots of the code used to compute the benchmarks and applications in Krach et al (2026).
Description
The included software tools allow users to conduct pseudo-3D Stokes simulations with a geometry-informed drag term as well as analytical drag terms using DuMux. Users can determine permeability, volumetric flux, and local pressure and velocity fields for both the geometries featured in the publication and custom-defined domains.
Pseudo3D_Stokes: DuMuxsubmodule Pseudo-3D-Stokes Module for Varying Apertures is a DuMux module developed within academic research. DuMux is a simulation toolkit specializing in Finite Volume discretization, multi-physics model coupling, and flow and transport processes in porous media. This module is designed to help researchers plan, optimize, or analyze microfluidic systems through easy-to-use numerical simulations tools based on the Stokes equations.
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It utilizes .pgm files as input to generate numerical grids. These files should contain 8-bit grayscale values representing the relative height of a microfluidic cell, which can be derived from microscopy images of microfluidic experiments using appropriate image processing techniques. Using the .pgm files, the python module localdrag (see below) may be used to create the suitable drag prefactor fields lambda1 and lambda2 or the user can choose the analytical drag formulation.
For further details, refer to our publication (see below). Please check out the README for information on requirements, building DuMux including its submodule and examples. localdrag: python preprocessing module localdrag is a python module that generates geometry-informed prefactor maps for pseudo-3D Stokes simulations in DuMux, based on local pore morphology. It serves as a preprocessing tool for the DuMux module pseud3D_stokes and is automatically included when pseudo3D_stokes is cloned with the recurse-submodules option (recommended, see README).
Related datasets and repositories: POREMAPS, 3D Stokes solver used to create reference solutions: git repository, DaRUS dataset DuMux: Website, git repository Pseudo3D_Stokes: git repository Image dataset of micromodel with precipitation: DaRUS dataset, research paper localdrag python module for preprocessing and data handling: git repository Input data and results for all domains in Krach et al. (2024): DaRUS dataset
Links
Where it is published
- Dataverse dataset page darus.uni-stuttgart.de/dataset.xhtml?persistentId=doi%3A10.18419%2FDARUS-5624 ↗
landing page · from darus uni stuttgart de
- DOI doi.org/10.18419/darus-5624 ↗
DOI / persistent id · from darus uni stuttgart de
Catalogue records · 1
- Dataverse API darus.uni-stuttgart.de/api/datasets/:persistentId/?persistentId=doi%3A10.18419%2FDARU… ↗
metadata API · from darus uni stuttgart de
Topics
- Stated by source
- Computer and Information Science · Earth and Environmental Sciences · Engineering
- From keywords
- Computer Science & AI · Earth & Environmental Science · Engineering
- Inferred from text
- Computational methods in fluid flow, heat and mass transfer 78% · Image 75% · Microscopy 75% · Simulation 75%
Provenance · 1 source records, 16 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DaRUS | doi:10.18419/DARUS-5624 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:field:401204 | enrichment · darus uni stuttgart de | taxonomy-embedding@1.1.0 | title+keywords+description (78%) |
| concepts[field].dataverse_subject:computer-and-information-science | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /subjects |
| concepts[field].dataverse_subject:earth-and-environmental-sciences | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /subjects |
| concepts[field].dataverse_subject:engineering | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /subjects |
| concepts[field].local:field:computer-science-ai | mapping · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /subjects |
| concepts[field].local:field:earth-environmental | mapping · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /subjects |
| concepts[field].local:field:engineering | mapping · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /subjects |
| concepts[method].local:method:simulation | enrichment · darus uni stuttgart de | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:image | enrichment · darus uni stuttgart de | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:microscopy | enrichment · darus uni stuttgart de | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | |
| description | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /description |
| publication_date | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | |
| title | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | /name |
| updated_date | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 | |
| version_label | source · darus uni stuttgart de | connector:darus_uni_stuttgart_de@1.0.0 |