Data · dataset · 2025
Global peatlands - microbiological data
Listed in DATADOI
Description
Nitrous oxide fluxes, microbiological (sequencing, qPCR) and soil physicochemical parameters data of peatlands globally We sampled gas and soil in 29 regions throughout the A (rainy tropical), C (temperate), and D (boreal) climate types of the Köppen classification from six continents during the vegetation period between August 2011 and June 2018, following a standard protocol. Within the sites, we established 1–4 stations 15–500 m apart to maximize the captured environmental variation.
Each of the 196 stations were equipped with 3–5 opaque PVC 65 L truncated conical chambers 1.5–5 m apart and an observation well (perforated, 50 mm diameter PP-HT pipe wrapped in geotextile; 1 m in length). From each of the 645 chambers, N2O fluxes were measured following the static chamber method using PVC collars (0.5 m diameter, installed to 0.1 m depth in soil). Soil samples of 150–200 g were collected from the chambers at 0–10 cm depth after the final gas sampling, and transported to laboratories in Tartu, Estonia.
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The homogenized samples were divided into subsamples for physical–chemical analyses and DNA extraction. The samples for chemical analyses were stored at 4 °C and microbiological samples were stored at –20 °C. DNA extraction was provided at the Tartu University environmental microbiology laboratory (see details below). Soil physico-chemical analysis, DNA extraction, DNA library preparation, and sequencing, Quantitative PCR were performed.
Links
Where it is published
- Dataverse dataset page datadoi.ee/dataset.xhtml?persistentId=doi%3A10.23673%2FRE-564 ↗
landing page · from datadoi ee
- DOI doi.org/10.23673/re-564 ↗
DOI / persistent id · from datadoi ee
Catalogue records · 1
- Dataverse API datadoi.ee/api/datasets/:persistentId/?persistentId=doi%3A10.23673%2FRE-5… ↗
metadata API · from datadoi ee
Topics
- Stated by source
- Other
- From keywords
- Earth & Environmental Science · Life Sciences · Microbiology
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DATADOI | doi:10.23673/RE-564 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3107 | mapping · datadoi ee | vocabulary-mapper@1.0.0 | keywords['microbiology'] |
| concepts[field].dataverse_subject:other | source · datadoi ee | connector:datadoi_ee@1.0.0 | /subjects |
| concepts[field].local:field:earth-environmental | mapping · datadoi ee | connector:datadoi_ee@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · datadoi ee | connector:datadoi_ee@1.0.0 | /subjects |
| concepts[modality].local:modality:sequencing | enrichment · datadoi ee | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · datadoi ee | connector:datadoi_ee@1.0.0 | |
| description | source · datadoi ee | connector:datadoi_ee@1.0.0 | /description |
| publication_date | source · datadoi ee | connector:datadoi_ee@1.0.0 | |
| title | source · datadoi ee | connector:datadoi_ee@1.0.0 | /name |
| updated_date | source · datadoi ee | connector:datadoi_ee@1.0.0 | |
| version_label | source · datadoi ee | connector:datadoi_ee@1.0.0 |