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Data · dataset · 2024

One scaffold, two conformations: The ring-flip of the messenger InsP8 occurs under cytosolic conditions

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Inositol poly- and pyrophosphates (InsPs and PP-InsPs) are central eukaryotic messengers.

Description

These very highly phosphorylated molecules can exist in two distinct conformations, a canonical one with five phosphoryl groups in equatorial positions, and a “flipped” axial conformation. Using 13C-labeled InsPs / PP-InsPs, the behavior of these molecules was investigated by 2D-NMR under solution conditions reminiscent of a cytosolic environment.

Remarkably, the most highly phosphorylated messenger InsP8 readily adopts both conformations at physiological conditions. Environmental factors - such as pH, metal cation composition, and temperature - strongly influence the conformational equilibrium. Thermodynamic data revealed that the transition of InsP8 from the equatorial to the axial conformation is, in fact, an exothermic process.

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The speciation of InsPs and PP-InsPs also affects their interaction with protein binding partners; addition of Mg2+ decreased the binding constant Kd of InsP8 to an SPX protein domain. The results illustrate that PP-InsP speciation reacts very sensitively to solution conditions, suggesting it might act as an environment-dependent molecular switch.

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Life Sciences
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Biochemistry and cell biology 68%
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Redatadoi:10.5281/zenodo.766563412 d agoJSON v1
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concepts[field].anzsrc:group:3101enrichment · redata anii org uytaxonomy-embedding@1.1.0title+keywords+description (68%)
concepts[field].local:field:life-sciencesmapping · redata anii org uyconnector:redata_anii_org_uy@1.0.0/subjects
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