Omics · study · 2026
Acute combination of nitrogen and light induces the simulta-neous accumulation of astaxanthin and lutein in continuous cultures of the microalga Chromochloris zofingiensis
Listed in NCBI GEO
Carotenoids are essential pigments in photosynthesis and other physiological processes, present in various organisms.
Description
Microalgae are considered an important natural source for the commercial production of some of these compounds. The accumulation of the carotenoids astaxanthin and lutein in response to nitrogen and light availability has been optimized in continuous photoautotrophic cultures of Chromochloris zofingiensis.
Astaxanthin cellular content increased significantly as the nitrate concentration in the feed medium decreased, while that of lutein remained largely unchanged. The cellular levels of lutein and astaxanthin were inversely correlated with the nitrogen content of the biomass. Thus, for 4% N in the dry biomass, accumulation of astaxanthin was highest and that of lutein lowest.
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The opposite was recorded for 9% N. Average irradiance positively affected lutein accumulation at both high and low nitrate, whereas that of astaxanthin did only increase under nitrogen-limiting conditions. An integrated analysis of transcriptomics and carotenoid profiling data provides evidence that the response to nitrogen is more significant than that to light availability, and that a synergy exists between both factors, with enhancement of their individual effects.
Regulation appears to be orchestrated at several levels: the expression pattern of cyclases suggests a redirection of lycopene to β-carotene, which is converted into astaxanthin through overexpression of BKT1. In turn, slightly higher lutein values are achieved by altering the α-carotene/lutein ratio, due to upregulation of CYP97A1 and CYP97C, especially under high irradiance conditions. The differential responses of astaxanthin and lutein to nitrogen and light availability could enable the programmed generation of C. zofingiensis biomass in continuous culture with a specific astaxanthin to lutein ratio, through careful adjustment of the nitrate concentration in the feed medium, using light irradiance as a modulator.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE317nnn/GSE317028 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE317028 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1405694 ncbi.nlm.nih.gov/bioproject/PRJNA1405694 ↗
project · from NCBI GEO
- PubMed 41901421 pubmed.ncbi.nlm.nih.gov/41901421 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Plant biology 69%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE317028 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3108 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |