Data · dataset · 2025
Replication data for "Genomic insights into host shifts between Plasmodium vivax and Plasmodium simium in Latin America."
Listed in DataSuds
These data and scripts are accompanying the manuscript: "Genomic insights into host shifts between Plasmodium vivax and Plasmodium simium in Latin America" by Margaux J. M. Lefebvre*, Fanny Degrugillier, Céline Arnathau, Camila González, Silvia Rondón, Andrés Link, Andrea.
Description
Chaves, Julio A. Benavides, Aline Alves Scarpellini Campos, Edmilson dos Santos, Rosana Huff, Cláudia Maria Dornelles Silva, Ezequiel Vanderhoeven, Benoit De Thoisy, Michael C. Fontaine2§*, Franck Prugnolle1§* & Virginie Rougeron13,14§* (*, contact person; § co-supervisors and co-last authors).
The archive here includes the SNP polymorphism data in VCF format used for dataset_HF analysis (see Supplementary Figure 1) the manuscript accompanying GitHub repository in a zipped folder.
Links
Where it is published
- Dataverse dataset page dataverse.ird.fr/dataset.xhtml?persistentId=doi%3A10.23708%2FRCOGR6 ↗
landing page · from dataverse ird fr
- DOI doi.org/10.23708/rcogr6 ↗
DOI / persistent id · from dataverse ird fr
Catalogue records · 1
- Dataverse API dataverse.ird.fr/api/datasets/:persistentId/?persistentId=doi%3A10.23708%2FRCOG… ↗
metadata API · from dataverse ird fr
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Medicine & Health · Social Science
- Inferred from text
- Evolutionary biology 70%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataSuds | doi:10.23708/RCOGR6 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3104 | enrichment · dataverse ird fr | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:social-science | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| created_date | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | |
| description | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /description |
| publication_date | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | |
| title | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /name |
| updated_date | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | |
| version_label | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 |