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Data · collection · 2018

Heat stress gene expression in three notothenioid species

Listed in NASA Earthdata CMR

The datasets were cDNA sequence reads generated from Illumina HySeq2500 sequencing of reverse transcribed RNA derived from three notothenioid fish species.

Description

The sequence data are raw reads from the sequencer that anyone can use and analyze using their own bioinformatics tool set. The three species were heat stressed with the same protocol, and gene expression induced by the stress was examined for the gill tissue, and comprise part of the data set.

A multi-tissue transcriptome was also generated for each species for use in mapping the experimental gill sequence reads to quantify levels of all expressed genes. This comprise the rest of the data set.

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Topics

Stated by source
Fish · Not provided
Inferred from text
Sequencing 75%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
NASA Earthdata CMRC1214598815-SCIOPS14 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NASA CMRconnector:nasa_cmr@1.0.0
concepts[measured_variable].gcmd:earth-science/biological-classification/animals-vertebrates/fishsource · NASA CMRconnector:nasa_cmr@1.0.0
concepts[modality].local:modality:sequencingenrichment · NASA CMRkeyword-concept-rules@1.0.0title+description (75%)
concepts[platform].gcmd_platform:not-providedsource · NASA CMRconnector:nasa_cmr@1.0.0
descriptionsource · NASA CMRconnector:nasa_cmr@1.0.0/umm/Abstract
license_textsource · NASA CMRconnector:nasa_cmr@1.0.0
publication_datesource · NASA CMRconnector:nasa_cmr@1.0.0
spatialsource · NASA CMRconnector:nasa_cmr@1.0.0/umm/SpatialExtent
temporalsource · NASA CMRconnector:nasa_cmr@1.0.0/umm/TemporalExtents
titlesource · NASA CMRconnector:nasa_cmr@1.0.0/umm/EntryTitle
version_labelsource · NASA CMRconnector:nasa_cmr@1.0.0