Data · dataset · 2022
The gene sequences of Xenocypridinae
Listed in ScienceDB
80 sequence samples were collected, involving 12 individuals.
Description
It contains two mitochondrial genes: cytochrome oxidase subunit I (CO ⅰ), cytochrome b (Cyt b), and five single copy nuclear genes: early growth response genes 1 and 2B (EGR1 and egr2b) Photoreceptor retinal binding protein (IRBP), recombination activating 2 (RAG2), rhodopsin 1 (Rh1). Take the muscle or fin of fish from each sample for DNA extraction and sequencing.
Select the DNA extraction kit of Tiangen biochemical technology (Beijing) Co., Ltd. to process the collected muscle and fin tissue to obtain the whole genome DNA of the sample, and then use it for PCR amplification, All PCR products were tested and purified by 1% agarose gel electrophoresis and sequenced by Wuhan Ai Kangjian Biotechnology Co., Ltd. Double ended sequencing results were spliced using seqman (DNAStar, Madison, WI, USA).
Links
Where it is published
- DOI doi.org/10.11922/sciencedb.j00112.00018 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.11922%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.11922/sciencedb.j00112.00018 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |