Data · dataset · 2022
Self-organized pendulum of inductions between the epiblast and extraembryonic endoderm support post-implantation progression of mouse blastoids
Listed in IISH Dataverse
Embryos form partly by tissue self-organization caused by nonlinear cell interactions.
Description
Here, we create a partial mouse embryo model to decipher self-organizing principles underlying the co-development of the epiblast (Epi) and Extraembryonic endoderm (XEn). We activate naive embryonic stem cells to form a late blastocyst Epi/XEn-like niche (3D, hydrogel-free, serum-free).
Once established, these two lineages autonomously progress in minimal medium to form an inner pro-amniotic-like cavity surrounded by a polarized Epi, and covered with visceral endoderm (VE)-like cells. We observe that progression occurs through a sequence of reciprocal inductions by which the Epi supports the primitive endoderm (PrE) to produce a basal lamina that subsequently regulates Epi polarization/cavitation, which, in return, channels the transcriptomic progression to Visceral endoderm (VE).
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Finally, the VE contributes to Epi bifurcation into both anterior- and posterior-like states. Similarly, boosting the formation of PrE-like cells within blastoids supports developmental progression. Overall, we argue that self-organization can arise from a pendulum of lineages inductions propagating overtime.
Links
Where it is published
- Dataverse dataset page dataverse.nl/dataset.xhtml?persistentId=doi%3A10.34894%2FGSOHSD ↗
landing page · from datasets iisg amsterdam
- DOI doi.org/10.34894/gsohsd ↗
DOI / persistent id · from datasets iisg amsterdam
Catalogue records · 1
- Dataverse API dataverse.nl/api/datasets/:persistentId/?persistentId=doi%3A10.34894%2FGSOH… ↗
metadata API · from datasets iisg amsterdam
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Medicine & Health
- Inferred from text
- Evolutionary biology 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| IISH Dataverse | doi:10.34894/GSOHSD | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3104 | enrichment · datasets iisg amsterdam | taxonomy-embedding@1.1.0 | title+keywords+description (75%) |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| created_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| description | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /description |
| publication_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| title | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /name |
| updated_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| version_label | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 |