Data · dataset · 2023
Data and code for: Physiological and behavioural resistance of malaria vectors in rural West-Africa: a data mining study to adress their fine-scale spatiotemporal heterogeneity, drivers, and predictability
Listed in DataSuds
Description
These data and scripts are accompanying the manuscript "Physiological and behavioural resistance of malaria vectors in rural West-Africa: a data mining study to adress their fine-scale spatiotemporal heterogeneity, drivers, and predictability" by Paul Taconet, Dieudonne Diloma Soma, Barnabas Zogo, Karine Mouline, Frederic Simard, Alphonsine Amanan Koffi, Roch Kounbobr Dabiré, Cedric Pennetier, and Nicolas Moiroux. The manuscript has been posted as a preprint on biorXiv (doi.org/10.1101/2022.08.20.504631).
In this data-mining work, we modeled a set of indicators of physiological resistances to insecticide (prevalence of three target-site mutations) and biting behaviours (early- and late-biting, exophagy) of anopheles mosquitoes in two rural areas of West-Africa, located in Burkina Faso and Cote d'Ivoire. To this aim, we used mosquito field collections along with heterogeneous, multisource and multi-scale environmental data.
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The objectives were i) to assess the small-scale spatial and temporal heterogeneity of the indicators, ii) to better understand their drivers, and iii) to assess their spatio-temporal predictability, at scales that are consistent with operational action. The explanatory variables covered a wide range of potential environmental determinants of vector resistance to insecticide or feeding behaviour: vector control, human availability and nocturnal behaviour, macro and micro-climatic conditions, landscape, etc.
Contents Input datasets and the R script used for the data analyses are provided. Because the models may take very long to fit (due to the size of the raw data), they were pre-fit, saved as .rds files ('R Data Serialization' format), and made available in the "models" folder. The R script used to answer to one of the reviewer's question (reviewer n°1, question n°1) is also included.
Links
Where it is published
- Dataverse dataset page dataverse.ird.fr/dataset.xhtml?persistentId=doi%3A10.23708%2FLV8GEW ↗
landing page · from dataverse ird fr
- DOI doi.org/10.23708/lv8gew ↗
DOI / persistent id · from dataverse ird fr
Catalogue records · 1
- Dataverse API dataverse.ird.fr/api/datasets/:persistentId/?persistentId=doi%3A10.23708%2FLV8G… ↗
metadata API · from dataverse ird fr
Topics
- Stated by source
- Medicine, Health and Life Sciences
- From keywords
- Life Sciences · Mathematics & Statistics · Medicine & Health · Psychology & Behavioral Science
- Inferred from text
- Epidemiology 72%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataSuds | doi:10.23708/LV8GEW | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:4202 | enrichment · dataverse ird fr | taxonomy-embedding@1.1.0 | title+keywords+description (72%) |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:mathematics-statistics | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| concepts[field].local:field:psychology-behavioral | mapping · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /subjects |
| created_date | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | |
| description | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /description |
| publication_date | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | |
| title | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | /name |
| updated_date | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 | |
| version_label | source · dataverse ird fr | connector:dataverse_ird_fr@1.0.0 |