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Data · dataset · 2023

Genotypes and population allele frequencies in Atlantic and Pacific herring samples

Listed in Researchdata.se

Individual genotypes, sample IDs and pool-wise allele freqeuncies used in "A long-standing hybrid population between Pacific and Atlantic herring in a subarctic fjord of Norway" (GBE-230119).

Description

The data are stored as tab-separated, gzipped textfiles. For the pool frequencies, sample names are in the header.

For the individuals, the genotypes for each snp are stored as a single string with out spaces or tabs. The order is the indicated in the sample file, and each individual is represente by two characters (ie haplotype 1 and haplotype 2). Thus, the first and second character represents the first individual, the third and fourth cahncater the second individual et c.

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Where it is published

Catalogue records · 1

Topics

Provenance · 1 source records, 8 field assertions
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Researchdata.seoai:researchdata.se:doi-10-17044-scilifelab-22361761/012 d agoJSON v1
FieldAssertionExtractorEvidence
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concepts[field].local:field:earth-environmentalmapping · researchdata seconnector:researchdata_se@1.0.0
concepts[field].local:field:life-sciencesmapping · researchdata seconnector:researchdata_se@1.0.0
concepts[field].local:field:medicine-healthmapping · researchdata seconnector:researchdata_se@1.0.0
descriptionsource · researchdata seconnector:researchdata_se@1.0.0/metadata/dc/description
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publication_datesource · researchdata seconnector:researchdata_se@1.0.0
titlesource · researchdata seconnector:researchdata_se@1.0.0/metadata/dc/title