Data · dataset · 2023
Genotypes and population allele frequencies in Atlantic and Pacific herring samples
Listed in Researchdata.se
Individual genotypes, sample IDs and pool-wise allele freqeuncies used in "A long-standing hybrid population between Pacific and Atlantic herring in a subarctic fjord of Norway" (GBE-230119).
Description
The data are stored as tab-separated, gzipped textfiles. For the pool frequencies, sample names are in the header.
For the individuals, the genotypes for each snp are stored as a single string with out spaces or tabs. The order is the indicated in the sample file, and each individual is represente by two characters (ie haplotype 1 and haplotype 2). Thus, the first and second character represents the first individual, the third and fourth cahncater the second individual et c.
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.22361761 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Ecology · Life Sciences · Medicine & Health
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-22361761/0 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |