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Data · dataset · 2012

Ensembl/Entrez hg19/GRCh37 Consensus Genes

Listed in DataCite

The genes listed in these files were generated by comparing the cross-references between the Ensembl and Entrez-gene databases.

Description

To arrive at a set of "consensus" genes, genes were only selected where Ensembl refers to an Entrez-gene with the same coordinates, and that Entrez-gene entry refers back to the same Ensembl gene. Nearly all cases of inconsistent cross-referencing are genes annotated based on electronic predictions, or genes with multiple or inconsistent mappings.

For these genes, we then obtained the HUGO approved gene identifier. The coordinates for all genes are mapped using hg19/GRChB37. These were generated by Will Bush, and the procedure used is described in more detail at the blog post below.

Links

Topics

From keywords
Genetics
Provenance · 1 source records, 10 field assertions
SourceKeyLast seenRaw
DataCite10.6084/m9.figshare.10311313 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
byte_sizesource · DataCiteconnector:datacite@1.0.0
concepts[field].fos:biological-sciencessource · DataCiteconnector:datacite@1.0.0
concepts[field].fos:computer-and-information-sciencessource · DataCiteconnector:datacite@1.0.0
created_datesource · DataCiteconnector:datacite@1.0.0
descriptionsource · DataCiteconnector:datacite@1.0.0/data/attributes/descriptions
licensesource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
publication_datesource · DataCiteconnector:datacite@1.0.0/data/attributes/dates
titlesource · DataCiteconnector:datacite@1.0.0/data/attributes/titles/0/title
updated_datesource · DataCiteconnector:datacite@1.0.0