Data · dataset · 2026
Sequencing data — [Soybean Root scRNA‑seq + ATAC‑seq Analytical Workflow]
Listed in ScienceDB
Files c1_S1_L002_R2_001.fastq.gz and e2_S1_L002_R2_001.fastq.gz are sequencing outputs generated by Novogene Co., Ltd.
Description
(Beijing). Specifically, c1_S1_L002_R2_001.fastq.gz corresponds to sequencing data of sample c1, whereas e2_S1_L002_R2_001.fastq.gz represents sequencing data of sample e2.
The contents within the two files comprise nucleic‑acid sequences obtained from second‑generation high‑throughput sequencing of two mutants, together with per‑base sequencing quality scores. Both files are in FASTQ format. The file size of c1_S1_L002_R2_001.fastq is 10.0 GB, and that of e2_S1_L002_R2_001.fastq is 9.23 GB.
Read the rest (1 more)
Library quality inspection results show that the peak profiles are qualified with valid peak pattern descriptions. For cellranger‑atac count analysis, the following parameter was specified: --sample=sampleA‑1,sampleA‑2,sampleA‑3,sampleA‑4.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.iga.001dv ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Bioinformatics and computational biology 68% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.IGA.001dv | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (68%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |