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Data · dataset · 2020

Transmission analysis of a large TB outbreak in London: a mathematical modelling study using genomic data

Listed in LSHTM Data Compass

Supplementary Material and Supporting Data for ‘Transmission analysis of a large TB outbreak in London: a mathematical modelling study using genomic data’ as published in Microbial Genomics.

Description

The phylogenetic tree-building software beast2 (version 2.6.1) was used to build timed phylogenetic trees. The beast xml file is provided here, along with the H37Rv NC000962.3 reference genome.

Links

Where it is published

Catalogue records · 1

Topics

From keywords
Earth & Environmental Science · Humanities · Life Sciences · Medicine & Health · Social Science
Inferred from text
Epidemiological modelling 78% · Genome sequencing 65%
Provenance · 1 source records, 10 field assertions
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FieldAssertionExtractorEvidence
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concepts[field].local:field:life-sciencesmapping · lshtm ac ukconnector:lshtm_ac_uk@1.0.0
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concepts[field].local:field:social-sciencemapping · lshtm ac ukconnector:lshtm_ac_uk@1.0.0
concepts[modality].local:modality:genome-sequencingenrichment · lshtm ac ukkeyword-concept-rules@1.0.0title+description (65%)
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