Data · dataset · 2026
<p>Comparative analysis of structural disorder in the TNFSF members interacting (A and C) and non-interacting with S100 proteins (B and D).</p>
Listed in ZivaHub
Description
<p>Aligned intrinsic disorder profiles of the interacting (<b>A</b>) and non-interacting cytokines (<b>B</b>). Disorder propensity was evaluated by PONDR<sup>®</sup> FIT [<a href="plosone.org/article/info:doi/10.1371/journal.pone.0341400#pone.0341400.ref081" target="_blank">81</a>], and amino acid sequences were aligned using Clustal Omega multiple sequence alignment tool [<a href="plosone.org/article/info:doi/10.1371/journal.pone.0341400#pone.0341400.ref082" target="_blank">82</a>] available at <a href="ebi.ac.uk/jdispatcher/msa/clustalo?stype=protein" target="_blank">ebi.ac.uk/jdispatcher/msa/clustalo?stype=protein</a> [<a href="plosone.org/article/info:doi/10.1371/journal.pone.0341400#pone.0341400.ref064" target="_blank">64</a>].
Aligned 3D structures of the interacting (<b>C</b>) and non-interacting cytokines (<b>D</b>). 3D structural models for all proteins were generated by AlphaFold [<a href="plosone.org/article/info:doi/10.1371/journal.pone.0341400#pone.0341400.ref083" target="_blank">83</a>]. Multiple structural alignment was conducted by SALIGN web server freely accessible to the academic community at <a href="salilab.org/salign" target="_blank">salilab.org/salign</a> [<a href="plosone.org/article/info:doi/10.1371/journal.pone.0341400#pone.0341400.ref084" target="_blank">84</a>].</p>
Links
Where it is published
- DOI doi.org/10.1371/journal.pone.0341400.g009 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Biochemistry and cell biology · Cancer · Chemistry · Earth & Environmental Science · Genetics · Immunology · Infectious diseases · Life Sciences · Medicine & Health
Provenance · 1 source records, 14 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34026971 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:field:320211 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:group:3101 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cell Biology'] |
| concepts[field].anzsrc:group:3105 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].anzsrc:group:3204 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Immunology'] |
| concepts[field].local:field:chemistry | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |