Table · dataset · 2026
Oxford Nanopore direct RNA sequencing data from MHV-A59 wild-type and nsp15 H262A mutant samples
Listed in figshare and Loughborough Research Repository — shown once because both records carry DOI 10.6084/m9.figshare.33971464.v1
Description
<p dir="ltr">This dataset contains Oxford Nanopore direct RNA sequencing data generated from mouse hepatitis virus A59 (MHV-A59) samples, including wild-type and nsp15 H262A mutant virus samples.</p><p dir="ltr">Five RNA samples were multiplexed and sequenced on the same Oxford Nanopore RNA004 flow cell: a mock sample, MHV-wt 1, MHV-wt 3, MHV-mut 1, and MHV-mut 3. Total RNA was extracted using TRIzol reagent, followed by poly(A) RNA enrichment using a VAHTS poly(A) enrichment workflow.
Libraries were prepared for Oxford Nanopore direct RNA sequencing using the RNA004 workflow with a custom reverse-transcription-adapter (RTA) barcoding strategy.</p><p dir="ltr">Sequencing was performed on flow cell FAZ51928 from 6–9 March 2026. Reads were demultiplexed using Warpdemux. The deposited dataset contains raw POD5 signal data together with associated sequencing outputs, sample metadata, and documentation describing sample identities and barcode assignments.</p><p dir="ltr">The dataset was generated to support analyses of MHV RNA, including viral transcript profiles and poly(A) tail characteristics.
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The four virus-containing samples comprise two wild-type and two nsp15 H262A mutant samples. The mock sample was sequenced in the same multiplexed run and is retained as part of the complete sequencing dataset.</p><p dir="ltr">Further information on file organization, sample-to-barcode correspondence, and dataset contents is provided in the accompanying README and sample metadata files.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.33971464.v1 ↗
DOI / persistent id · from figshare com
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from figshare com
Topics
- From keywords
- Animal cell and molecular biology · Animal cell and molecular biology · Astronomy & Astrophysics · Chemistry · Chemistry · Computer Science & AI · Computer Science & AI · Earth & Environmental Science · Earth & Environmental Science · Economics & Finance · Economics & Finance · Engineering · Engineering · Humanities · Humanities · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Medicine & Health · Medicine & Health · Ocean & Atmospheric Science · Psychology & Behavioral Science · Social Science · Social Science · Virology · Virology
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 2 source records, 34 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| figshare | oai:figshare.com:article/33971464 | 10 d ago | JSON v1 |
| Loughborough Research Repository | oai:figshare.com:article/33971464 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].anzsrc:field:310706 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:310706 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:310902 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Animal cell and molecular biology'] |
| concepts[field].anzsrc:field:310902 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Animal cell and molecular biology'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:engineering | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · figshare com | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/description |
| license | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/rights |
| publication_date | source · figshare com | connector:figshare_com@1.0.0 | |
| title | source · figshare com | connector:figshare_com@1.0.0 | /metadata/dc/title |