Constarium
← Search

Data · dataset

[Controlled laboratory study using model organisms Micromonas commoda RCC 299 and Ruegeria pomeroyi DSS-3] - Bacterial transcriptional response to picoeukaryote Micromonas commoda (Effects of Climate Change Variables on Microbial Autotroph-Heterotroph Carbon Flux)

Listed in Biological and Chemical Oceanography Data Management Office (BCO-DMO) ERDDAP

Marine biogeochemical cycles are built on interactions between surface ocean microbes, particularly those connecting phytoplankton primary producers to heterotrophic bacteria.

Description

However, direct influences of bacteria on phytoplankton physiology are poorly known. In this study, three marine bacteria (Ruegeria pomeroyi DSS-3, Stenotrophomonas sp.

SKA14, and Polaribacter dokdonensis MED152) were co-cultured with green alga Micromonas commoda, and the phytoplankter's transcriptome was studied by RNASeq. The presence of each bacterium invoked transcriptomic remodeling by M. commoda after 8 h in co-culture. Some aspects of the algal transcriptomic response were conserved across all three bacteria, while others were restricted to a single bacterium.

Read the rest (1 more)

M. commoda had both rapid and extensive responses to heterotrophic bacteria.

Links

Where it is published

Documentation and papers

Catalogue records · 1

Topics

Inferred from text
Pollution and contamination 71% · RNA sequencing 65%
Provenance · 1 source records, 6 field assertions
SourceKeyLast seenRaw
Biological and Chemical Oceanography Data Management Office (BCO-DMO) ERDDAPbcodmo_dataset_928039_v112 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · erddap bco dmo orgconnector:erddap_bco_dmo_org@1.0.0
concepts[field].anzsrc:group:4105enrichment · erddap bco dmo orgtaxonomy-embedding@1.1.0title+keywords+description (71%)
concepts[field].local:field:ocean-atmosphericmapping · erddap bco dmo orgconnector:erddap_bco_dmo_org@1.0.0
concepts[modality].local:modality:rna-seqenrichment · erddap bco dmo orgkeyword-concept-rules@1.0.0title+description (65%)
descriptionsource · erddap bco dmo orgconnector:erddap_bco_dmo_org@1.0.0/summary
titlesource · erddap bco dmo orgconnector:erddap_bco_dmo_org@1.0.0/title