Data · dataset · 2015
DNA hypomethylation-mediated activation of Cancer/Testis Antigen 45 ( CT45 ) genes is associated with disease progression and reduced survival in epithelial ovarian cancer
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ABSTRACTEpithelial ovarian cancer (EOC) is a highly lethal malignancy due to a lack of early detection approaches coupled with poor outcomes for patients with clinically advanced disease.
Description
Cancer-testis (CT) or cancer-germline genes encode antigens known to generate spontaneous anti-tumor immunity in cancer patients. CT45 genes are a recently discovered six-member family of X-linked CT genes with oncogenic function.
Here, we determined CT45 expression in EOC and fully defined its epigenetic regulation by DNA methylation. CT45 was silent and hypermethylated in normal control tissues, but a large subset of EOC samples showed increased CT45 expression in conjunction with promoter DNA hypomethylation. In contrast, copy number status did not correlate with CT45 expression in the TCGA database for EOC.
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CT45 promoter methylation inversely correlated with both CT45 mRNA and protein expression, the latter determined using IHC staining of an EOC TMA. CT45 expression was increased and CT45 promoter methylation was decreased in late-stage and high-grade EOC, and both measures were associated with poor survival. CT45 hypomethylation was directly associated with LINE-1 hypomethylation, and CT45 was frequently co-expressed with other CT antigen genes in EOC.
Decitabine treatment induced CT45 mRNA and protein expression in EOC cells, and promoter transgene analyses indicated that DNA methylation directly represses CT45 promoter activity. These data verify CT45 expression and promoter hypomethylation as possible prognostic biomarkers, and suggest CT45 as an immunological or therapeutic target in EOC. Treatment with decitabine or other epigenetic modulators could provide a means for more effective immunological targeting of CT45.
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- Repository landing page tandf.figshare.com/articles/dataset/DNA_hypomethylation_mediated_activation_of_i_… ↗
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- DOI doi.org/10.6084/m9.figshare.1456233.v1 ↗
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Documentation and papers
- Creative Commons Attribution 4.0 International creativecommons.org/licenses/by/4.0/legalcode ↗
license · from DataCite
- IsSupplementTo 10.1080/15592294.2015.1062206 doi.org/10.1080/15592294.2015.1062206 ↗
publication · from DataCite
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1456233.v1 ↗
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- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1456233.v1 ↗
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Topics
- Stated by source
- Biological sciences · Clinical medicine
- From keywords
- Biochemistry and cell biology · Cancer · Chemistry · Genetics · Immunology · Life Sciences
- Inferred from text
- Computed tomography 50% · Disease 75%
Related
- Has versionDNA hypomethylation-mediated activation of Cancer/Testis Antigen 45 ( CT45 ) genes is associated with disease progression and reduced survival in epithelial ovarian cancer
- Possibly the same asDNA hypomethylation-mediated activation of Cancer/Testis Antigen 45 ( CT45 ) genes is associated with disease progression and reduced survival in epithelial ovarian cancer
Provenance · 1 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.1456233.v1 | 12 d ago | JSON v1 |
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| concepts[disease].local:disease:cancer | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
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| concepts[field].local:field:chemistry | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Chemistry'] |
| concepts[field].local:field:life-sciences | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Biological Sciences'] |
| concepts[modality].local:modality:ct | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (50%) |
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