Excel · study · 2026
Deep FLASH-seq profiling of purified canine sensory neurons uncovers species-specific signatures relevant to pain and itch
Listed in NCBI GEO
Naturally occurring pain and itch disorders in the domestic dog represent an important and underexploited opportunity for translational sensory neuroscience.
Description
These conditions affect companion animals in a manner that largely mirrors human disease, highlighting the need for a detailed comparative understanding of canine somatosensory neurobiology. Here, we present a single-cell transcriptomic characterisation of the canine dorsal root ganglion (DRG), generated to provide molecular insights into sensory neuron diversity in a species of direct veterinary and biomedical relevance.
We develop a novel mechanical dissociation and fluorescence-activated cell sorting strategy that enables purification of intact whole neurons from adult canine DRG, followed by deep, full-length RNA sequencing using FLASH-seq. This approach yields high-quality transcriptional profiles with molecular depth analogous to deep neuronal profiling approaches applied in human DRG, enabling resolution of detailed neuronal identities and subtype-specific gene programs.
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Using these data, we identify a diverse repertoire of canine sensory neuron clusters that conform to conserved principles of DRG molecular organization observed across species, including peptidergic and non-peptidergic nociceptors, low-threshold mechanoreceptors, proprioceptors, and thermosensory populations. Leveraging the depth of the transcriptomic data, we perform cross-species comparisons with human and mouse DRG datasets, revealing broad conservation of pain- and itch-relevant pathways and therapeutic targets, alongside biologically meaningful divergence.
We further identify species-specific differences in neuronal subtype-restricted expression of the pharmacologically relevant receptors IL31RA and SSTR2, which we validate using in situ hybridization in canine DRG tissue and contextualize using human spatial transcriptomic data. Finally, we provide evidence that genes implicated in canine domestication are non-randomly enriched in specific sensory neuron populations, suggesting that evolutionary history may have shaped aspects of somatosensory function.
Overall, these data represent a resource for comparative sensory neuroscience and inform translational interpretation of pain and itch therapeutics across species.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE327nnn/GSE327952 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327952 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1453266 ncbi.nlm.nih.gov/bioproject/PRJNA1453266 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Animal neurobiology 76% · Disease 75% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE327952 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:field:310906 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (76%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |