Imaging · dataset · 2026
PEP Confocal Microscopy Raw Images
Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.6084/m9.figshare.31073320.v1
<p dir="ltr">Described in Schuller et al., 2026.
Description
For confocal imaging, 4ml cultures of the relevant strains were grown in TAP liquid medium for 5 days. 24 hours before imaging, cells were pelleted via centrifugation at 1500 x g for 15 minutes at RT and resuspended in an equal volume of High-Salt-Minimal (HSM) media (Sueoka et al., 1967). On the day of imaging, cells were pelleted again, and the cell pellet washed with 1X Phosphate-Buffered Saline (PBS).
Cells were then fixed via incubation for 15 minutes in 3.7% PFA, followed by a further washing with 1X PBS. Prior to observation, cells were subjected to 15 minutes of staining with 0.5µg/ml DAPI (ThermoScientific) in the dark. All imaging was conducted using a LSM980 Axio Observer Confocal Microscope (Zeiss) with a 63X oil lens, and a total of 30 images collected per strain.</p><p dir="ltr"><br></p><p dir="ltr">456 = PEPS3-Venus-3xFLAG</p><p dir="ltr">457 = PEPS9-Venus-3xFLAG</p><p dir="ltr">647 = PEPS12-Venus-3xFLAG</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.31073320.v1 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Life Sciences · Life Sciences · Life Sciences · Materials Science · Materials Science · Materials Science · Microscopy · Microscopy · Microscopy · Plant biochemistry · Plant biochemistry · Plant biochemistry · Plant cell and molecular biology · Plant cell and molecular biology · Plant cell and molecular biology
Provenance · 3 source records, 25 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/31073320 | 6 d ago | JSON v1 |
| Deakin Research Online | oai:figshare.com:article/31073320 | 6 d ago | JSON v1 |
| DMU Figshare | oai:figshare.com:article/31073320 | 6 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].anzsrc:field:310802 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Plant biochemistry'] |
| concepts[field].anzsrc:field:310802 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Plant biochemistry'] |
| concepts[field].anzsrc:field:310802 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Plant biochemistry'] |
| concepts[field].anzsrc:field:310803 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Plant cell and molecular biology'] |
| concepts[field].anzsrc:field:310803 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Plant cell and molecular biology'] |
| concepts[field].anzsrc:field:310803 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Plant cell and molecular biology'] |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:imaging | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:microscopy | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['microscopy'] |
| concepts[modality].local:modality:microscopy | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['microscopy'] |
| concepts[modality].local:modality:microscopy | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['microscopy'] |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |