Data · dataset · 2025
Microbial genomic DNA was extracted from the root, rhizosphere and bulk soil compartments from grassland phytometer plant species and was then used as templates for bacterial 16S and/or fungal ITS rDNA paired-end amplicon sequencing using Illumina MiSeq
Listed in GBIF
Investigation of the root and rhizosphere microbial community composition of forb and grass phytometer plants out planted in sites of different land-use intensity in the German Biodiversity Exploratories (Hainich-Dün) by means of 16S and ITS rDNA paired-end amplicon sequencing using Illumina MiSeq.
Description
The study focused on the effect of plant functional group (grasses vs. forbs) and land-use as well as edaphic parameters onto the bacterial and fungal community and diversity.
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006742.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/a547baa4-9b4d-4751-9c8d-4d35e0938079 ↗
landing page · from gbif
- DOI doi.org/10.15468/3fdvjv ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006742 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/a547baa4-9b4d-4751-9c8d-4d35e0938079 ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
- Inferred from text
- Microbial taxonomy 76% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | a547baa4-9b4d-4751-9c8d-4d35e0938079 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].anzsrc:field:310409 | enrichment · gbif | taxonomy-embedding@1.1.0 | title+keywords+description (76%) |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |