Data · dataset · 2022
Daily patterns in parasite processes
Listed in Teesside University Research Data Repository
Supplmentary data for paper "Daily patterns in parasite processes: diel variation of fish louse transcriptomes".
Description
In this project, diel changes in gene transcription are examined for the first time in any crustacean parasite, revealing that approximately half of the Argulus foliaceus annotated transcriptome displays significant daily rhythmicity. Raw RNA sequence reads generated by this project are available in the NCBI Sequence Read Archive and can be found under BioProject PRJNA764202.
Supplementary data in this project is as follows: Supplementary Data S1 = deseq2 output, Supplementary Data S2 = wang clusters output, Supplementary Table S1 = metadata, Supplementary Table S2 = eJTK output.
Links
Where it is published
- DOI doi.org/10.17632/vcjsfhfdph.2 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Earth & Environmental Science · Gene expression
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/vcjsfhfdph.2 | 8 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:field:310505 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Gene Expression'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |