Data · dataset · 2022
SNP array data for a native European flat oyster (Ostrea edulis) population
Listed in Teesside University Research Data Repository
Genotype data for a hatchery-derived European flat oyster population (n=840 individuals) with matching growth phenotype data (see link below).
Description
Four growth-related traits were measured in the experimental population: Body weight (BW, the weight of an individual oyster including the shell ), Shell length (SL, the maximum distance between the anterior and posterior margins), Shell height (SH, the maximum distance between the hinge to the furthermost edge), and Shell width (SW, the maximum distance at the thickest part of the two shell valves).
Individual oysters were genotyped using the combined-species Affymetrix Axiom® oyster SNP-array. The genotype data is available in VCF format for markers passing quality control (QC) filters (see steps below).
Links
Where it is published
- DOI doi.org/10.17632/v7ppb2xr99.2 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Aquaculture · Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/v7ppb2xr99.2 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:field:300501 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Aquaculture'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |