Data · collection · 2019
JAMSTEC EXTREMOBASE
Listed in NASA Earthdata CMR
Extremophiles Research Program of Extremobiosphere Research Center (XBR) initiated the genome sequencing project of extremophiles for understanding biodiversity and environmental adaptability of microbes.
Description
The complete genome sequences have been determined for Bacillus-related species, proteobacterial species and other species their genomic information is released from ExtremoBase. Metagenomic information in deep subsurface and deep-sea environments will be available from this site.
Links
Get the data
- GET DATA godac.jamstec.go.jp/catalog/data_catalog/metadataDisp/JAMSTEC_EXTREMOBASE?lang=en ↗
download · from NASA CMR
Catalogue records · 2
- CMR record cmr.earthdata.nasa.gov/search/concepts/C1673974743-SCIOPS.html ↗
catalogue entry · from NASA CMR
- CMR UMM-JSON cmr.earthdata.nasa.gov/search/concepts/C1673974743-SCIOPS.umm_json ↗
metadata API · from NASA CMR
Topics
- Stated by source
- Aquatic Ecosystems · Bacteria/Archaea · SHIPS
- Inferred from text
- Environmental biotechnology 71% · Genome sequencing 75% · Sequencing 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Earthdata CMR | C1673974743-SCIOPS | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[field].anzsrc:group:4103 | enrichment · NASA CMR | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[measured_variable].gcmd:earth-science/biological-classification/bacteria-archaea | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biosphere/ecosystems/aquatic-ecosystems | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[modality].local:modality:genome-sequencing | enrichment · NASA CMR | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NASA CMR | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[platform].gcmd_platform:ships | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| created_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| description | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/Abstract |
| publication_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| title | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/EntryTitle |
| updated_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| version_label | source · NASA CMR | connector:nasa_cmr@1.0.0 |