Data · dataset · 2012
Calculating time from submission to publication / Degree of burden in submitting a paper
Listed in DataCite
Description
Inspied by this post on biostar: biostars.org/post/show/54473/calculating-time-from-submission-to-publication-degree-of-burden-in-submitting-a-paper/ initialy asked by Ryan Delahanty the script 'pubmed.sh" downloads the the journals from ncbi.nlm.nih.gov/books/NBK3827/table/pubmedhelp.pubmedhelptable45/ , the 'eignefactors' from eigenfactor.org for each journal , It scans pubmed (starting from year=2000) and get the difference between the date(submitted) and the date(accepted).
The code for the java program used to download pubmed is available here: github.com/lindenb/jsandbox/blob/master/src/sandbox/PubmedDump.java Note: pubmed contains some errors: e.g. submitted > accepted (eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&id=20591334&retmode=xml) or some dates in the future: ( eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&id=12921703&retmode=xml )
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/Calculating_time_from_submission_to_publicati… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.96403 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.96403 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.96403 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Computer and information sciences
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.96403 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (65%) |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |