Data · dataset · 2023
Cryo-electron microscopy structure and densities of a pentameric ligand-gated ion channel GLIC
Listed in Researchdata.se
Description
This Dataset contains cryo-electron microscopy (cryo-EM) densities and a pdb model of a Gloeobacter violaceus ligand-gated ion channel (GLIC). The densities were generated with RELION data processing software and the model was built with COOT software. Additionally the dataset contains a validation report generated by PDB/EMDB deposition webpage, where the data has been uploaded and is currently on hold until publication of the paper (deposit-pdbe.wwpdb.org/deposition).
The densities, the model and the validation report were requested by reviewers for a publication titled 'Discovery of lipid binding sites in a ligand-gated ion channel by integrating simulations and cryo-EM' currently accesible on Biorxiv and under review at eLife.
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.21908892 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Life Sciences · Medicine & Health · Structural biology
- Inferred from text
- Microscopy 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-21908892/0 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[modality].local:modality:microscopy | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |