Omics · study · 2026
Jasmonic acid restricts cadmium uptake by activating phenylpropanoid-mediated apoplastic barrier formation in rice roots
Listed in NCBI GEO
Cadmium accumulation in rice threatens crop productivity and food safety.
Description
This RNA-seq study examined how exogenous jasmonic acid affects the response of Zhonghua 11 (ZH11) rice roots to cadmium stress. Transcriptome sequencing of untreated control, cadmium-treated, and cadmium plus jasmonic acid-treated roots was used to identify pathways associated with reduced cadmium uptake.
The results highlighted phenylpropanoid biosynthesis, lignification, and root apoplastic barrier formation as important components of the jasmonic acid response under cadmium stress.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE344nnn/GSE344343 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE344343 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1515283 ncbi.nlm.nih.gov/bioproject/PRJNA1515283 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE344343 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |