Data · dataset · 2022
Supplementary files of "TMT-based quantitative proteome data of MSP1 overexpressed rice"
Listed in Teesside University Research Data Repository
Supplementary files related to the data article "TMT-based quantitative proteome data of MSP1 overexpressed rice" C.W. Min, J.W. Jang, G.H. Lee, G. Ravi, S.T. Kim.
Description
Data in Brief (2022). This article reporting potential PRR candidates which may function as receptor for recognition of MSP1 in rice.
This data complements the original research article published in Journal of Proteomics: C.W. Min, J.W. Jang, G.H. Lee, R. Gupta, H.J. Park, H.S. Cho, S.R. Park, S. Kwon, L. Cho, K. Jung, Y. Kim, Y. Wang, S.T. Kim, TMT-based quantitative membrane proteomics identified PRRs potentially involved in the perception of MSP1 in rice leaves, J. Proteomics 267 (2022) 104687, doi.org/10.1016/j.jprot.2022.104687. Supplementary table legends Supplementary Table 1.
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List of primers used in this study. Supplementary Table 2. Identification of significantly modulated proteins in the rice leaves by TMT-based quantitative proteomic analysis.
Supplementary Table 3. MapMan analysis of whole differential proteins. Supplementary Table 4.
Functional characterization of proteins related to RLK, MAPK, calcium signaling, hormone signaling, and stress & redox using MapMan analysis.
Links
Where it is published
- DOI doi.org/10.17632/ngh58j6c6w.2 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Mass spectrometry · Social Science
- Inferred from text
- Bioinformatics and computational biology 75% · Tabular 65%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/ngh58j6c6w.2 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · researchdata tees ac uk | taxonomy-embedding@1.0.0 | title+keywords+description (75%) |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[modality].local:modality:mass-spectrometry | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Proteomics'] |
| concepts[modality].local:modality:tabular | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |