Omics · study · 2026
An endophytic indole inhibits fungal mevalonate diphosphate decarboxylase and mycotoxin production
Listed in NCBI GEO
Fungal disease and deoxynivalenol contamination remain difficult to control with mechanisms that suppress both pathogen fitness and toxin output.
Description
This RNA-seq dataset profiles Fusarium graminearum PH-1 mycelia treated with vehicle or indole-3-propionic acid (IPA) and supports transcriptomic analysis of the compensatory trichothecene and terpenoid-backbone response associated with reduced farnesyl diphosphate and deoxynivalenol output.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE347nnn/GSE347107 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347107 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1528706 ncbi.nlm.nih.gov/bioproject/PRJNA1528706 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE347107 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |