Table · dataset · 2025
Illumina NGS RNA-seq and RRBS Sequencing on Spaceflight Mouse Retina
Listed in NASA Data Portal
This study was under the umbrella of the NASA Rodent Research-1 project consortium.
Description
In this project, 16-week-old female C57 BL/6J mice were sent to International Space Station (ISS) in NASA's animal enclosure modules (AEM) and were kept inside ISS middeck for 37 days. We used transcrptomic and methylomic approaches to investigated the spaceflight-associated neuro-ocular syndrome (SANS) using retinas from those spaceflight mice.
Links
Get the data
- Resource lsda.jsc.nasa.gov/Experiment/exper/13380 ↗
download · from data nasa gov
- Resource osdr.nasa.gov/bio/repo/data/missions/SpaceX-4 ↗
download · from data nasa gov
- Resource purl.bioontology.org/ontology/NCBITAXON/10090 ↗
download · from data nasa gov
- Resource osdr.nasa.gov/bio/repo/data/studies/OSD-397 ↗
download · from data nasa gov
- Resource ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE159771 ↗
download · from data nasa gov
Where it is published
- NASA Data Portal dataset page data.nasa.gov/dataset/illumina-ngs-rna-seq-and-rrbs-sequencing-on-spacefligh… ↗
landing page · from data nasa gov
- DOI doi.org/10.26030/jgp8-e115 ↗
DOI / persistent id · from data nasa gov
Catalogue records · 1
- CKAN API data.nasa.gov/api/3/action/package_show?id=e5fc28c6-09b7-4525-9cda-408bdae70… ↗
metadata API · from data nasa gov
Topics
- From keywords
- Astronomy & Astrophysics · Earth & Environmental Science · Life Sciences · Ocean & Atmospheric Science · Physics
- Inferred from text
- RNA sequencing 65% · Sequencing 75% · Space sciences 68%
Provenance · 1 source records, 14 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Data Portal | e5fc28c6-09b7-4525-9cda-408bdae70e58 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:5109 | enrichment · data nasa gov | taxonomy-embedding@1.0.0 | title+keywords+description (68%) |
| concepts[field].local:field:astronomy | mapping · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| concepts[field].local:field:physics | mapping · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · data nasa gov | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · data nasa gov | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| description | source · data nasa gov | connector:data_nasa_gov@1.0.0 | /notes |
| license_text | source · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| publication_date | source · data nasa gov | connector:data_nasa_gov@1.0.0 | |
| title | source · data nasa gov | connector:data_nasa_gov@1.0.0 | /title |
| updated_date | source · data nasa gov | connector:data_nasa_gov@1.0.0 |