Constarium
← Search

Omics · dataset · 2026

Cell death-inducing effectors in the latent necrotrophic pathogen Cercospora zeina of maize

Listed in ZivaHub and Deakin Research Online and DMU Figshare and HKU DataHub and Swinburne Figshare and DaYta Ya Rona and SUNScholarData and figshare and Loughborough Research Repository and GRANTS Data and UP Research Data Repository — shown once because both records carry DOI 10.25403/upresearchdata.32972570.v1

Description

<p dir="ltr">The datasets underpin a PhD study titled "Transcriptomics and structural phylogenetics reveals cell death-inducing effectors in the latent necrotrophic pathogen Cercospora zeina of maize." This fungal pathogen enters the stomata, developing asymptomatically, without producing haustoria-like structures for up to 28 days before symptoms develop. RNA sequencing was used to characterise the transcriptomic dynamics during infection, providing insights into the molecular mechanisms supporting in-planta pathogen development and enabling investigation of effector expression during this time.

Two distinct transcriptional waves were identified during the infective period. The first wave was characterized by limited growth despite the expression of genes involved in basic cellular processes and immune evasion. In contrast, the second wave was characterised by exponential growth and enrichment of genes associated with detoxification and carbohydrate catabolism, collectively supporting C. zeina as a latent necrotroph.

Read the rest (2 more)

A total of 140 differentially expressed effector genes were identified, with most being upregulated in the mid-stage during the transition to necrotrophy. During this stage, structurally related members of the NIS1 effector family were expressed, including a previously undescribed NIS1 variant, CzNIS1b. Transient expression of CzNIS1b in Nicotiana benthamiana induced a cell death response similar to that of canonical NIS1 orthologs, despite structural models revealing an atypical α-helix at the C-terminus.</p><p><br></p><p dir="ltr">To identify additional cell death-inducing effectors, structural phylogenetics was used to define effector structural families (ESFs) and identify candidate secreted effector proteins (CSEPs) from C. zeina with potential cell death-inducing activity.

C. zeina CSEPs clustering with functionally characterized cell death-inducing effector orthologs within ESFs were hypothesized to induce cell death when transiently expressed in Nicotiana benthamiana. Indeed, C. zeina CSEPs from three distinct cell death-inducing families were chosen for biological validation and shown to induce cell death in N. benthamiana. Expression analysis showed that C. zeina ESFs generally contained no more than two highly expressed genes, suggesting limited structural redundancy and the possibility for effector gene silencing during infection. </p>

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
Sequencing 75%
Provenance · 11 source records, 75 field assertions
SourceKeyLast seenRaw
ZivaHuboai:figshare.com:article/329725705 d agoJSON v1
Deakin Research Onlineoai:figshare.com:article/329725705 d agoJSON v1
DMU Figshareoai:figshare.com:article/329725705 d agoJSON v1
HKU DataHuboai:figshare.com:article/329725705 d agoJSON v1
Swinburne Figshareoai:figshare.com:article/329725705 d agoJSON v1
DaYta Ya Ronaoai:figshare.com:article/329725705 d agoJSON v1
SUNScholarDataoai:figshare.com:article/329725705 d agoJSON v1
figshareoai:figshare.com:article/329725704 d agoJSON v1
Loughborough Research Repositoryoai:figshare.com:article/329725704 d agoJSON v1
GRANTS Dataoai:figshare.com:article/329725704 d agoJSON v1
UP Research Data Repositoryoai:figshare.com:article/329725704 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].anzsrc:field:310805mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · dayta nwu ac zavocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · figshare comvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · grantsdata jst go jpvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · datahub hku hkvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · figshare swinburne edu auvocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · scholardata sun ac zavocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].anzsrc:field:310805mapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['Plant pathology']
concepts[field].local:field:astronomymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · grantsdata jst go jpconnector:grantsdata_jst_go_jp@1.0.0
concepts[field].local:field:earth-environmentalmapping · dayta nwu ac zaconnector:dayta_nwu_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:earth-environmentalmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:earth-environmentalmapping · scholardata sun ac zaconnector:scholardata_sun_ac_za@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare swinburne edu auconnector:figshare_swinburne_edu_au@1.0.0
concepts[field].local:field:earth-environmentalmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:economics-financemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:economics-financemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:engineeringmapping · dayta nwu ac zaconnector:dayta_nwu_ac_za@1.0.0
concepts[field].local:field:engineeringmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:engineeringmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:engineeringmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:humanitiesmapping · dayta nwu ac zaconnector:dayta_nwu_ac_za@1.0.0
concepts[field].local:field:humanitiesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:humanitiesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · grantsdata jst go jpconnector:grantsdata_jst_go_jp@1.0.0
concepts[field].local:field:life-sciencesmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · scholardata sun ac zaconnector:scholardata_sun_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · dayta nwu ac zaconnector:dayta_nwu_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare swinburne edu auconnector:figshare_swinburne_edu_au@1.0.0
concepts[field].local:field:life-sciencesmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:life-sciencesmapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:life-sciencesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:materials-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:medicine-healthmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:ocean-atmosphericmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:psychology-behavioralmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:social-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:social-sciencemapping · dayta nwu ac zaconnector:dayta_nwu_ac_za@1.0.0
concepts[field].local:field:social-sciencemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:social-sciencemapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[modality].local:modality:rna-seqmapping · figshare comvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · scholardata sun ac zavocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · dayta nwu ac zavocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · figshare swinburne edu auvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · datahub hku hkvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · grantsdata jst go jpvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:rna-seqmapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['RNA sequencing']
concepts[modality].local:modality:sequencingenrichment · zivahub uct ac zakeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/description
licensesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/rights
publication_datesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
titlesource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/title