Data · dataset · 2026
<p>Upstream Variability in IFNγ Signaling Amongst Keratinocytes from Asymptomatic Donors and Donors with Ulcerative Disease.</p>
Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.1371/journal.ppat.1014612.g006
<p>Keratinocytes isolated from asymptomatic donors <b>(A)</b> or donors with ulcerative disease <b>(B)</b> were pretreated with specified doses of IFNγ for 24 hours, then infected with GFP-expressing HSV-1.
Description
Live cell images were acquired every 2 hours for 48 hours and normalized to measure GFP fluorescence. <b>(C)</b> The amount of IFNγ required to inhibit 50% of viral GFP expression was calculated for keratinocytes from both asymptomatic and ulcerative donors at 24 hours post infection. <b>(D)</b> Expression of IFNGR1 and STAT1 was measured by RT-qPCR in untreated keratinocytes from asymptomatic or ulcerative donors. <b>(E)</b> Representative images from a single donor illustrating the detection of pSTAT1 in the nucleus of keratinocytes treated with various doses of IFNγ for the specified time. <b>(F)</b> Representative images from each donor at 60 minutes following treatment with 1U of IFNγ highlight heterogeneity in nuclear pSTAT1 signal.
Yellow is nuclear DAPI staining, blue is membrane staining with wheat-germ agglutinin, and pink is pSTAT1. Scale bar represents 100µm <b>(E</b> and <b>F)</b>. <b>(G)</b> Normalized average nuclear fluorescence of pSTAT1 at specified times following treatment with specified doses of IFNγ, separated by donor cohort. Data was normalized using the asymptomatic donor pool (0% set by 0U IFNγ, 100% set by 100U IFNγ).
Read the rest (2 more)
Each point is derived from the average fluorescence of at least 29,000 nuclei. <b>(H)</b> Box-and-whisker plot of raw nuclear fluorescence of pSTAT1 at 240 minutes following treatment with specified doses of IFNγ, separated by donor severity. Each bar represents the inner quartile range of raw fluorescence in at least 29,000 nuclei. <sup>*</sup><i>P</i> < 0.05, <sup>**</sup> <i>P</i> < 0.01, <sup>***</sup> <i>P</i> < 0.001, NS, not significant; Unpaired t-test models were used to analyze fold change in gene expression.
N = 4 donors and 3 replicates per donor in each cohort <b>(A-D)</b> or 5 donors and 2 replicates per donor in each cohort <b>(E-H)</b>.</p>
Links
Where it is published
- DOI doi.org/10.1371/journal.ppat.1014612.g006 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Biochemistry and cell biology · Biochemistry and cell biology · Biochemistry and cell biology · Cancer · Cancer · Cancer · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Immunology · Immunology · Immunology · Infectious diseases · Infectious diseases · Infectious diseases · Life Sciences · Life Sciences · Life Sciences · Medicine & Health · Medicine & Health · Medicine & Health · Physics · Physics · Physics · Virology · Virology · Virology
Provenance · 3 source records, 34 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34036181 | 12 d ago | JSON v1 |
| Deakin Research Online | oai:figshare.com:article/34036181 | 12 d ago | JSON v1 |
| DMU Figshare | oai:figshare.com:article/34036181 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[disease].local:disease:cancer | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[disease].local:disease:cancer | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[disease].local:disease:disease | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:field:310706 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:310706 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:310706 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:320211 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:field:320211 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:field:320211 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:group:3101 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cell Biology'] |
| concepts[field].anzsrc:group:3101 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Cell Biology'] |
| concepts[field].anzsrc:group:3101 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Cell Biology'] |
| concepts[field].anzsrc:group:3204 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Immunology'] |
| concepts[field].anzsrc:group:3204 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Immunology'] |
| concepts[field].anzsrc:group:3204 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Immunology'] |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:physics | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:physics | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:physics | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |