Data · dataset · 2025
Human CD56⁺ monocytes, CD56⁻ monocytes and NK cells: single-cell transcriptome sequencing data via Smart-seq2
Listed in ScienceDB
This dataset contains single-cell transcriptome sequencing data of three human immune cell subsets, generated using the Smart-seq2 technology.
Description
Specifically, the dataset includes 3 biological replicates of CD56⁺ monocytes,3 biological replicates of CD56⁻ monocytes and 3 biological replicates of natural killer (NK) cells. All cells were isolated from human peripheral blood (demographic information and ethical approval details are provided in associated metadata).
The Smart-seq2 platform was used for library preparation and sequencing, enabling full-length transcript coverage of individual cells. Sequencing was performed with paired-end reads (read length: 150bp) on an Illumina NovaSeq 6000 platform, with an average of ~5 million reads per cell.This dataset captures the transcriptional profiles of distinct immune cell subsets, facilitating comparative analyses of gene expression patterns between CD56⁺/CD56⁻ monocytes and NK cells, and supporting studies on immune cell differentiation, functional specialization, or related disease mechanisms.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.29177 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Disease 75% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.29177 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |