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Data · collection · 2022

AB-DB: Force-Field parameters, MD trajectories, QM-based data, and Descriptors of Antimicrobials

Listed in DataCite

AB-DB is and open database of all-atom force-field parameters, molecular dynamics trajectories, quantum-mechanical properties, and curated physico-chemical descriptors of antimicrobial compounds.

Description

The collection stores more than 300 molecules belonging to 25 families that include the most relevant antibiotic classes in clinical use. Traditional descriptors are provided, together with properties obtained with Density Functional Theory calculations and less conventional descriptors extracted from molecular dynamics simulations in explicit solvent.

Force field parameters are provided for each compound.

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Topics

Stated by source
Basic medicine · Basic medicine
Inferred from text
Density functional theory 75%
Provenance · 2 source records, 10 field assertions
SourceKeyLast seenRaw
DataCite10.6084/m9.figshare.c.57527039 d agoJSON v1
DataCite10.6084/m9.figshare.c.5752703.v19 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
concepts[field].fos:basic-medicinesource · DataCiteconnector:datacite@1.0.0
concepts[field].fos:basic-medicinesource · DataCiteconnector:datacite@1.0.0
concepts[method].local:method:dftenrichment · DataCitekeyword-concept-rules@1.0.0title+description (75%)
created_datesource · DataCiteconnector:datacite@1.0.0
descriptionsource · DataCiteconnector:datacite@1.0.0/data/attributes/descriptions
licensesource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
publication_datesource · DataCiteconnector:datacite@1.0.0/data/attributes/dates
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updated_datesource · DataCiteconnector:datacite@1.0.0