Table · dataset · 2026
Identification of transmission clusters with high influence on shared parameter estimates in Bayesian phylodynamics - the empirics
Listed in Edmond
Description
Scripts and input files for the simulation of phylodynamic trees and sequence alignment as well as Bayesian inference of transmission rates from them; raw data shown in figures of the main text of the manuscript "Identification of transmission clusters with high influence on shared parameter estimates in Bayesian phylodynamics". The analyses of SARS-CoV-2 data are based on 826 sequences and their associated metadata available on GISAID up to January 19th 2025, via gisaid.org/EPI_SET_250119mc and under doi.org/10.55876/gis8.250119mc.
Links
Where it is published
- Dataverse dataset page edmond.mpg.de/dataset.xhtml?persistentId=doi%3A10.17617%2F3.DNLGXJ ↗
landing page · from edmond mpdl mpg de
- DOI doi.org/10.17617/3.dnlgxj ↗
DOI / persistent id · from edmond mpdl mpg de
Catalogue records · 1
- Dataverse API edmond.mpg.de/api/datasets/:persistentId/?persistentId=doi%3A10.17617%2F3.DN… ↗
metadata API · from edmond mpdl mpg de
Topics
- Stated by source
- Biology · Biology · Mathematics · Mathematics
- From keywords
- Astronomy & Astrophysics · Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Humanities · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Mathematics & Statistics · Medicine & Health · Ocean & Atmospheric Science · Physics · Social Science
- Inferred from text
- Computational ecology and phylogenetics 82% · Simulation 75% · Text 75%
Provenance · 2 source records, 29 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Edmond | doi:10.17617/3.DNLGXJ | 12 d ago | JSON v1 |
| Edmond | doi:10.17617/3.DNLGXJ | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
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| concepts[field].dataverse_subject:mathematics | source · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].dataverse_subject:mathematics | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:astronomy | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:chemistry | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:computer-science-ai | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:earth-environmental | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:economics-finance | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
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| concepts[field].local:field:life-sciences | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:materials-science | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:mathematics-statistics | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
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| concepts[field].local:field:medicine-health | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:ocean-atmospheric | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
| concepts[field].local:field:physics | mapping · edmond mpg de | connector:edmond_mpg_de@1.0.0 | /subjects |
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| title | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | /name |
| updated_date | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 | |
| version_label | source · edmond mpdl mpg de | connector:edmond_mpdl_mpg_de@1.0.0 |