Data · dataset · 2015
A "developmental hourglass" in fungi
Listed in DataCite
#PdTT Version 1.0 (January 2015) #This program develops algorithms for Phylostratigraphy, dN/dS ratio, Transcriptome age index (TAI) and Transcriptome divergence index (TDI) analysis. #Please cite: #Cheng X, Hui JHL, Lee YY, Law PTW, Kwan HS. 2015.
Description
A "developmental hourglass" in fungi. Mol Biol Evol. 32(6):1556-66. doi: 10.1093/molbev/msv047 Please read carefully the following before running the programs: README_TAI.txt for phylostratigraphy analysis and transcriptome age index (TAI) calculation, and README_TDI.txt for dN/dS ratio analysis and transcriptome divergence index (TDI) calculation.
The algorithms are implemented in Perl. Please make sure that Perl (perl.org/) is properly installed on your computer. All source codes are included in this fileset.
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You can modify some of the codes to suit the purpose of your study.
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/A_developmental_hourglass_in_fungi/1284022 ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.1284022 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1284022 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1284022 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Computer and information sciences
- From keywords
- Evolutionary biology · Genetics
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.1284022 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:biological-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |