Data · dataset
[Bacterial flow cytometry data] - Cell concentrations associated with genomics sampling to characterize bacterial responses to parasite-host metabolites from bottle incubation experiments in June of 2024 (Characterizing plankton parasite-host metabolites and the response of heterotrophic bacteria)
Listed in Biological and Chemical Oceanography Data Management Office (BCO-DMO) ERDDAP
Bottle-based incubation experiments were conducted with coastal seawater that was filtered to include only the bacterial fraction.
Description
Fresh filtrate from Scrippsiella acuminata cultures infected by Amoebophyra sp. were collected and added into coastal seawater to expose heterotrophic bacterial communities to parasite-host metabolites and explore changes in bacterial community composition and gene expression over time. Data reported here are cell concentrations of bulk heterotrophic bacteria measured via flow cytometry that accompanied samples collected for DNA metabarcoding and metatranscriptomics from the incubation bottles over time.
Links
Where it is published
- ERDDAP dataset info erddap.bco-dmo.org/erddap/info/bcodmo_dataset_962727_v1/index.html ↗
landing page · from erddap bco dmo org
Documentation and papers
- Dataset documentation osprey.bco-dmo.org/dataset/962727 ↗
documentation · from erddap bco dmo org
Catalogue records · 1
- ERDDAP tabledap access form erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_962727_v1.html ↗
metadata API · from erddap bco dmo org
Topics
- From keywords
- Ocean & Atmospheric Science
- Inferred from text
- Pollution and contamination 69%
Provenance · 1 source records, 5 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Biological and Chemical Oceanography Data Management Office (BCO-DMO) ERDDAP | bcodmo_dataset_962727_v1 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | |
| concepts[field].anzsrc:group:4105 | enrichment · erddap bco dmo org | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:ocean-atmospheric | mapping · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | |
| description | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | /summary |
| title | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | /title |