Data · dataset · 2023
sRNA sequence dataset
Listed in ScienceDB
Total RNAs were extracted from the culture supernatants of WT Trichoderma harzianum (Th) and the engineered Th-GFPi and Th-Pmt2i strains with TRIzol reagent (Invitrogen). sRNA libraries were prepared and sequenced with a unique molecular identifier (UMI)-based technology on the DNBSEQ platform by BGI.
Description
Three biological repeats were sequenced for each strain, and two Th-Pmt2i strains were sequenced. There are 12 datasets in this study, including Th (Th_1, Th_2, and Th_3), Th-GFPi (G2_1, G2_2, and G2_3), Th-Pmt2i-1 (P1_1, P1_2, and P1_3) and Th-Pmt2i-2 (P2_1, P2_2, and P2_3).
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.09709 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Bioinformatics and computational biology 69%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.09709 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:3102 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (69%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license_text | source · scidb cn | connector:scidb_cn@1.0.0 | |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |