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Table · dataset · 2026

Field bioremediation trial data and identifiability analysis code for petroleum-contaminated soil, Kyzylorda region, Kazakhstan

Listed in figshare and Loughborough Research Repository and GRANTS Data and UP Research Data Repository — shown once because both records carry DOI 10.6084/m9.figshare.33514384.v1

Description

<p dir="ltr">This deposit contains the raw field data and the complete analysis code behind the study of kinetic model identifiability in field-scale bioremediation of petroleum-contaminated soil.</p><p dir="ltr">The field trial was carried out between April and June 2026 at an oil-waste treatment site in the Kyzylorda region, Kazakhstan (45°42′ N, 65°28′ E). Six plots of 2 × 2 m, each holding 200 kg of soil, received one of the following treatments: an untreated control with no oil; oil with no further treatment; oil with mineral fertiliser; oil with fertiliser and reintroduced indigenous degrading strains; oil with fertiliser and a biopreparation based on the same strains; and oil with biochar.

Samples were taken on days 0, 13, 27, 41, 55, 69 and 83 and analysed for total petroleum hydrocarbons, pH, mineralisation, moisture, available nitrogen, phosphorus and potassium, and organic carbon. Air temperature was recorded on site at each sampling date.</p><p dir="ltr">The code fits six kinetic models to these data — zero order, first order, two-compartment, substrate Monod, Haldane and first order with multiplicative nitrogen limitation — and assesses the identifiability of their parameters through standard errors and residual sum-of-squares profiles.

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A separate Monte Carlo script establishes the degradation depth, number of sampling points and number of contaminant loading levels required for each model class to be identified.</p><p dir="ltr">Contents: field_data.csv (raw monitoring data); kinetic_analysis.py and numerical_experiment.py (analysis code); results_kinetic_parameters.csv, results_model_comparison.csv, results_profile_likelihood.csv, results_KN_series_length.csv and results_specific_rates.csv (computed results).

README.md documents the treatments, methods and how to reproduce the output. Running the two scripts reproduces Tables 1–8 of the associated article.</p><p dir="ltr">The field design includes no replication, so differences between treatments are reported as trends rather than confirmed effects. The control plot carried residual contamination from earlier operations and is excluded from the kinetic analysis.

Both points are documented in the README.</p><p dir="ltr">Requires Python 3.11 with numpy, scipy and pandas. Released under CC BY 4.0.</p>

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Where it is published

Catalogue records · 1

Topics

Provenance · 4 source records, 42 field assertions
SourceKeyLast seenRaw
figshareoai:figshare.com:article/335143844 d agoJSON v1
Loughborough Research Repositoryoai:figshare.com:article/335143844 d agoJSON v1
GRANTS Dataoai:figshare.com:article/335143844 d agoJSON v1
UP Research Data Repositoryoai:figshare.com:article/335143843 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · figshare comconnector:figshare_com@1.0.0
concepts[field].anzsrc:field:410303mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Bioremediation']
concepts[field].anzsrc:field:410303mapping · figshare comvocabulary-mapper@1.0.0keywords['Bioremediation']
concepts[field].anzsrc:field:410303mapping · grantsdata jst go jpvocabulary-mapper@1.0.0keywords['Bioremediation']
concepts[field].anzsrc:field:410303mapping · researchdata up ac zavocabulary-mapper@1.0.0keywords['Bioremediation']
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concepts[field].local:field:computer-science-aimapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
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concepts[field].local:field:economics-financemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:economics-financemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
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concepts[field].local:field:energymapping · researchdata up ac zaconnector:researchdata_up_ac_za@1.0.0
concepts[field].local:field:energymapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
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concepts[field].local:field:humanitiesmapping · figshare comconnector:figshare_com@1.0.0
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concepts[field].local:field:medicine-healthmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
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concepts[field].local:field:ocean-atmosphericmapping · figshare comconnector:figshare_com@1.0.0
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concepts[field].local:field:social-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
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descriptionsource · figshare comconnector:figshare_com@1.0.0/metadata/dc/description
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