Data · collection
Using Flow Cytometry, bacteria abundance was determined for samples collected in Oregon/California coastal waters, 2001-2003, GLOBEC, Northeast Pacific Program.
Listed in NASA Earthdata CMR
Standard cross shelf/slope sections (max. of 5) were routinely sampled with bottle casts to determine bacteria abundance and concentration of cells with high/low nucleic acid content.
Description
Sampling was conducted during 2001-2003 on 13 ship cruises to the study sites. Six depths were sampled focusing on the upper 100m with an emphasis on 0-50 depth zone and the depth of the chlorophyll-a maximum.
Flow Cytometry was used to determine abundances of: total bacteria, cells with high/low nucleic acid content, synechococcus and photosynthetic eukaryotes. Also reported are supporting ancillary nutrient and pigment data. These cross shelf sections (HH, NH, CR, RR, FM) are roughly equally spaced between 41.9 N to 44.7 N off coastal California/Oregon.
Read the rest (1 more)
Not all sections were sampled equally in time and space. Detailed cruise reports can be seen by using the URL address listed in the Related URL section of this document.
Links
Get the data
- globec.whoi.edu /jg/dir/globec/nep/ccs/ltop ↗
Directory of Data Page, please see: "fcm" (Ev & Barry Sherr investigators) (Flow Cytometry Counts)
download · from NASA CMR
Catalogue records · 2
- CMR record cmr.earthdata.nasa.gov/search/concepts/C1214155235-SCIOPS.html ↗
catalogue entry · from NASA CMR
- CMR UMM-JSON cmr.earthdata.nasa.gov/search/concepts/C1214155235-SCIOPS.umm_json ↗
metadata API · from NASA CMR
Topics
- Stated by source
- Bacteria/Archaea · FLOW CYTOMETRY · Plankton · SHIPS · WATER BOTTLES
- Inferred from text
- Environmental biotechnology 70%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Earthdata CMR | C1214155235-SCIOPS | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[field].anzsrc:group:4103 | enrichment · NASA CMR | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[instrument].gcmd_instrument:flow-cytometry | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[instrument].gcmd_instrument:water-bottles | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biological-classification/bacteria-archaea | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biosphere/ecosystems/aquatic-ecosystems/plankton | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[platform].gcmd_platform:ships | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| description | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/Abstract |
| license_text | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| spatial | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/SpatialExtent |
| temporal | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/TemporalExtents |
| title | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/EntryTitle |
| version_label | source · NASA CMR | connector:nasa_cmr@1.0.0 |